Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
473 1172

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:02,30:02 56:03,48:01 05:01,05:01 04:01,03:02 None 06:07,04:01 12:02,04:05
RPKM HLA_B rpkm 0.16 ; HLA_A rpkm 60.58 ; HLA_C rpkm 2.84 ; HLA_DRB1 rpkm 0.02 ; HLA_DQA1 rpkm 0.02 ; HLA_DQB1 rpkm 0.02
Note In HLA_B 56:03 and 48:01 , HLA_A 30:02 , HLA_DRB1 12:02 and 04:05 , HLA_DQA1 03:02 , HLA_DQB1 06:07 and 04:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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