Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Ns
Gender Male Age Not Available
Ethnicity African_american Tumour Source Metastasis, Liver

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
271 627

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,23:01 37:01,07:02 02:02,02:02 03:02,04:01 None 02:02,02:02 16:05,07:01
RPKM HLA_B rpkm 83.71 ; HLA_C rpkm 76.71 ; HLA_A rpkm 147.48 ; HLA_DQB1 rpkm 0.2 ; HLA_DQA1 rpkm 0.08 ; HLA_DRB1 rpkm 0.05
Note In HLA_DQB1 02:02 , HLA_DQA1 03:02 , HLA_DRB1 16:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Ns
Gender Male Age Not Available
Ethnicity African_american Tumour Source Metastasis, Liver
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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