Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Diffuse_large_b_cell_lymphoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Lymph_node, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
144 164

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,01:01 08:01,15:07 03:03,07:01 03:02,05:01 None 02:01,03:02 03:01,04:04
RPKM HLA_DQB1 rpkm 45.78 ; HLA_DQA1 rpkm 310.22 ; HLA_A rpkm 257.59 ; HLA_C rpkm 123.23 ; HLA_B rpkm 437.77 ; HLA_DRB1 rpkm 222.39
Note In HLA_DQB1 02:01 , HLA_DQA1 03:02 , HLA_C 07:01 , HLA_B 15:07 , HLA_DRB1 03:01 and 04:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Diffuse_large_b_cell_lymphoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Lymph_node, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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