Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Cerebrospinal_fluid

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
312 771

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 49:01,49:01 07:01,07:01 05:01,05:01 None 03:09,03:09 12:01,03:17
RPKM HLA_B rpkm 270.79 ; HLA_A rpkm 325.43 ; HLA_DQA1 rpkm 27.48 ; HLA_DRB1 rpkm 85.06 ; HLA_C rpkm 70.57 ; HLA_DQB1 rpkm 21.23
Note In HLA_DRB1 12:01 and 03:17 , HLA_C 07:01 , HLA_DQB1 03:09. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Cerebrospinal_fluid
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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