Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Signet_ring_adenocarcinoma
Gender Unknown, Female Age Not Available
Ethnicity Asian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
476 981

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:01 51:02,46:01 15:02,01:02 None None None 12:01,11:67
RPKM HLA_A rpkm 93.18 ; HLA_B rpkm 17.87 ; HLA_C rpkm 40.18 ; HLA_DRB1 rpkm 0.14
Note In HLA_A 02:01 , HLA_B 51:02 , HLA_C 15:02 , HLA_DRB1 12:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Signet_ring_adenocarcinoma
Gender Unknown, Female Age Not Available
Ethnicity Asian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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