Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
195 440

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 56:01,56:01 07:02,07:02 01:01,01:01 None 05:01,05:01 01:01,01:01
RPKM HLA_DRB1 rpkm 165.81 ; HLA_A rpkm 585.49 ; HLA_B rpkm 658.36 ; HLA_C rpkm 185.8 ; HLA_DQB1 rpkm 81.34 ; HLA_DQA1 rpkm 35.82
Note In HLA_DQA1 01:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified, Diffuse_large_b_cell_lymphoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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