Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Primitive_neuroectodermal_tumour-Medulloblastoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Asian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
631 1488

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:03 54:01,54:01 01:02,03:03 None None None 07:01,09:07
RPKM HLA_A rpkm 85.28 ; HLA_B rpkm 11.84 ; HLA_C rpkm 21.0 ; HLA_DRB1 rpkm 0.03
Note In HLA_A 26:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Primitive_neuroectodermal_tumour-Medulloblastoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Asian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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