Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
493 1100

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 07:02,15:27 04:01,07:02 03:02,01:02 None 05:01,05:01 01:02,15:01
RPKM HLA_C rpkm 112.21 ; HLA_B rpkm 218.91 ; HLA_A rpkm 564.72 ; HLA_DRB1 rpkm 0.16 ; HLA_DQA1 rpkm 0.69 ; HLA_DQB1 rpkm 1.14
Note In HLA_B 15:27 , HLA_DRB1 01:02 and 15:01 , HLA_DQA1 03:02 and 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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