Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Mixed_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Ascites

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
201 456

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:05,02:05 50:01,15:05 07:01,06:02 None None 04:01,04:01 None
RPKM HLA_A rpkm 27.62 ; HLA_C rpkm 40.66 ; HLA_DQB1 rpkm 0.06 ; HLA_B rpkm 3.32
Note In HLA_A 02:05 , HLA_C 07:01 , HLA_DQB1 04:01 , HLA_B 15:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Mixed_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Ascites
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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