Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Unknown Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
266 486

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 08:01,44:02 07:01,05:01 03:02,05:01 None 03:01,02:01 04:01,03:01
RPKM HLA_A rpkm 46.09 ; HLA_B rpkm 53.07 ; HLA_C rpkm 82.09 ; HLA_DQA1 rpkm 26.25 ; HLA_DQB1 rpkm 6.39 ; HLA_DRB1 rpkm 70.66
Note In HLA_A 02:01 , HLA_C 07:01 , HLA_DQA1 03:02 , HLA_DQB1 02:01 , HLA_DRB1 04:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Unknown Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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