Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Endometrioid_carcinoma
Gender Female Age None
Ethnicity None Tumour Source Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1195 2614

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 54:01,15:01 04:01,01:02 05:02,05:02 None None 13:07,15:01
RPKM HLA_B rpkm 42.4 ; HLA_A rpkm 123.59 ; HLA_DQA1 rpkm 0.02 ; HLA_C rpkm 87.23 ; HLA_DRB1 rpkm 0.05
Note In HLA_B 15:01 , HLA_DQA1 05:02 , HLA_DRB1 13:07 and 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Endometrioid_carcinoma
Gender Female Age None
Ethnicity None Tumour Source Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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