Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Unknown Age None
Ethnicity None Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
595 1345

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,02:06 48:01,51:01 14:02,08:01 06:01,03:02 None None 11:02,15:30
RPKM HLA_C rpkm 561.85 ; HLA_A rpkm 267.13 ; HLA_DRB1 rpkm 0.76 ; HLA_B rpkm 470.66 ; HLA_DQA1 rpkm 0.03
Note In HLA_A 02:06 , HLA_DRB1 11:02 , HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Unknown Age None
Ethnicity None Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background