Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Male Age None
Ethnicity African_american Tumour Source Ascites

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
201 240

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 58:01,58:01 04:01,04:01 01:02,01:02 None 06:02,06:02 15:03,13:07
RPKM HLA_DQA1 rpkm 45.37 ; HLA_DQB1 rpkm 42.64 ; HLA_B rpkm 27.69 ; HLA_A rpkm 30.18 ; HLA_C rpkm 49.91 ; HLA_DRB1 rpkm 56.02
Note In HLA_DRB1 15:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Male Age None
Ethnicity African_american Tumour Source Ascites
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background