Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Ovary Site Subtype Ns
Primary Histology Germ_cell_tumour Histology Subtype Teratoma
Gender Female Age None
Ethnicity Caucasian Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
247 539

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:02,68:02 44:03,37:04 07:01,07:01 None None 04:01,04:01 03:02,03:02
RPKM HLA_A rpkm 30.68 ; HLA_B rpkm 5.22 ; HLA_C rpkm 24.69 ; HLA_DQB1 rpkm 0.23 ; HLA_DRB1 rpkm 0.19
Note In HLA_B 44:03 , HLA_C 07:01 , HLA_DQB1 04:01 , HLA_DRB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Ovary Site Subtype Ns
Primary Histology Germ_cell_tumour Histology Subtype Teratoma
Gender Female Age None
Ethnicity Caucasian Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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