Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_t_cell_leukaemia
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
137 154

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,24:02 44:03,35:02 04:01,04:01 01:02,01:02 None None None
RPKM HLA_C rpkm 53.56 ; HLA_A rpkm 68.7 ; HLA_B rpkm 3.38 ; HLA_DQA1 rpkm 0.03
Note In HLA_A 24:02 , HLA_B 44:03 and 35:02 , HLA_DQA1 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_t_cell_leukaemia
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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