Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
344 787

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:01 13:01,40:06 03:04,03:04 05:02,05:02 None None 12:01,09:01
RPKM HLA_DRB1 rpkm 0.18 ; HLA_B rpkm 338.97 ; HLA_DQA1 rpkm 0.03 ; HLA_C rpkm 388.9 ; HLA_A rpkm 653.05
Note In HLA_DRB1 12:01 , HLA_B 40:06 , HLA_DQA1 05:02 , HLA_C 03:04 , HLA_A 26:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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