Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_b_cell_leukaemia
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1156 2829

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:01,02:01 39:01,44:02 05:01,12:03 03:02,03:02 None 03:09,03:09 04:08,14:103
RPKM HLA_A rpkm 132.08 ; HLA_C rpkm 71.2 ; HLA_DQA1 rpkm 8.14 ; HLA_DQB1 rpkm 1.54 ; HLA_B rpkm 143.28 ; HLA_DRB1 rpkm 14.3
Note In HLA_A 02:01 , HLA_DQA1 03:02 , HLA_DQB1 03:09 , HLA_B 39:01 , HLA_DRB1 04:08. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_b_cell_leukaemia
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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