Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
278 689

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,02:06 40:02,51:01 03:04,14:02 None None 03:09,03:09 11:01,12:01
RPKM HLA_DQB1 rpkm 2.73 ; HLA_DRB1 rpkm 2.01 ; HLA_C rpkm 42.07 ; HLA_A rpkm 18.72 ; HLA_B rpkm 23.72
Note In HLA_DQB1 03:09 , HLA_DRB1 11:01 and 12:01 , HLA_A 02:06 , HLA_B 40:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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