Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Soft_tissue Site Subtype Striated_muscle
Primary Histology Rhabdomyosarcoma Histology Subtype Embryonal, Alveolar
Gender Female Age Not Available
Ethnicity Unknown Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
284 683

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,24:15 35:01,35:01 04:01,04:01 05:02,01:02 None None 10:04,xx
RPKM HLA_A rpkm 29.7 ; HLA_B rpkm 86.07 ; HLA_C rpkm 98.09 ; HLA_DQA1 rpkm 0.08 ; HLA_DRB1 rpkm 0.05
Note In HLA_A 02:01 and 24:15 , HLA_DQA1 05:02 and 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Soft_tissue Site Subtype Striated_muscle
Primary Histology Rhabdomyosarcoma Histology Subtype Embryonal, Alveolar
Gender Female Age Not Available
Ethnicity Unknown Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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