Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary, Soft_tissue Site Subtype Ns, Smooth_muscle
Primary Histology Other, Leiomyosarcoma Histology Subtype Neoplasm, Ns
Gender Unknown, Female Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
313 812

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,33:03 44:03,44:03 14:03,14:03 None None 04:01,04:01 03:42,03:42
RPKM HLA_DRB1 rpkm 0.03 ; HLA_DQB1 rpkm 0.03 ; HLA_C rpkm 89.04 ; HLA_B rpkm 34.13 ; HLA_A rpkm 84.91
Note In HLA_DQB1 04:01 , HLA_C 14:03 , HLA_B 44:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary, Soft_tissue Site Subtype Ns, Smooth_muscle
Primary Histology Other, Leiomyosarcoma Histology Subtype Neoplasm, Ns
Gender Unknown, Female Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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