Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Male Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
265 307

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,68:02 15:03,15:10 02:02,03:04 None 01:01:02,13:01 02:01,02:02 03:08,07:01
RPKM HLA_DPB1 rpkm nan ; HLA_A rpkm nan ; HLA_A rpkm 207.53 ; HLA_B rpkm 206.57 ; HLA_DQB1 rpkm nan ; HLA_C rpkm nan ; HLA_DRB1 rpkm nan ; HLA_DRB1 rpkm 0.11 ; HLA_B rpkm nan ; HLA_C rpkm 112.91
Note In HLA_B 15:10 , HLA_DRB1 03:08. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Male Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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