Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Upper_aerodigestive_tract Site Subtype Sinonasal_and_nasal_cavity
Primary Histology Carcinoma Histology Subtype Squamous_cell_carcinoma
Gender Unknown Age None
Ethnicity None Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
125 268

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,02:01 07:02,35:08 07:02,03:03 None None 04:01,04:01 08:01,08:01
RPKM HLA_A rpkm 31.92 ; HLA_B rpkm 32.98 ; HLA_C rpkm 32.86 ; HLA_DQB1 rpkm 0.23 ; HLA_DRB1 rpkm 0.1
Note In HLA_A 02:01 , HLA_B 35:08 , HLA_DQB1 04:01 , HLA_DRB1 08:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Upper_aerodigestive_tract Site Subtype Sinonasal_and_nasal_cavity
Primary Histology Carcinoma Histology Subtype Squamous_cell_carcinoma
Gender Unknown Age None
Ethnicity None Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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