Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Male Age None
Ethnicity None Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
353 797

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,68:02 15:03,15:10 02:02,03:04 None 01:01:02,13:01 02:01,02:02 03:08,07:01
RPKM HLA_DPB1 rpkm nan ; HLA_A rpkm nan ; HLA_A rpkm 207.53 ; HLA_B rpkm 206.57 ; HLA_DQB1 rpkm nan ; HLA_C rpkm nan ; HLA_DRB1 rpkm nan ; HLA_DRB1 rpkm 0.11 ; HLA_B rpkm nan ; HLA_C rpkm 112.91
Note In HLA_B 15:10 , HLA_DRB1 03:08. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Male Age None
Ethnicity None Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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