Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Pleura Site Subtype Ns
Primary Histology Mesothelioma Histology Subtype Ns
Gender Male Age None
Ethnicity Caucasian Tumour Source Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
94 106

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,02:01 44:02,35:01 04:01,07:04 01:02,05:02 None 05:01,05:01 11:02,14:46
RPKM HLA_DQA1 rpkm 0.05 ; HLA_DQB1 rpkm 0.02 ; HLA_C rpkm 140.44 ; HLA_DRB1 rpkm 0.12 ; HLA_B rpkm 120.8 ; HLA_A rpkm 176.78
Note In HLA_DQA1 01:02 and 05:02 , HLA_DQB1 05:01 , HLA_C 07:04 , HLA_DRB1 11:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Pleura Site Subtype Ns
Primary Histology Mesothelioma Histology Subtype Ns
Gender Male Age None
Ethnicity Caucasian Tumour Source Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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