Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_leukaemia
Gender Female Age None
Ethnicity Caucasian Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
876 2099

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,32:01 14:02,37:01 06:02,08:02 01:03,01:03 None 06:03,03:09 13:01,03:02
RPKM HLA_A rpkm 38.93 ; HLA_DRB1 rpkm 39.49 ; HLA_C rpkm 32.67 ; HLA_DQB1 rpkm 8.23 ; HLA_DQA1 rpkm 1.52 ; HLA_B rpkm 51.47
Note In HLA_DRB1 13:01 and 03:02 , HLA_C 08:02 , HLA_DQB1 06:03 and 03:09 , HLA_DQA1 01:03 , HLA_B 14:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_leukaemia
Gender Female Age None
Ethnicity Caucasian Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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