Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Male Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
353 847

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 15:10,15:10 04:01,03:04 05:01,01:01 None 02:01,05:01 10:01,03:01
RPKM HLA_B rpkm 208.03 ; HLA_C rpkm 79.98 ; HLA_A rpkm 137.31 ; HLA_DRB1 rpkm 161.04 ; HLA_DQB1 rpkm 17.6 ; HLA_DQA1 rpkm 120.58
Note In HLA_B 15:10 , HLA_DRB1 03:01 , HLA_DQB1 02:01 , HLA_DQA1 01:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Male Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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