Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Soft_tissue Site Subtype Fibrous_tissue_and_uncertain_origin
Primary Histology Sarcoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
315 833

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,01:01 37:01,37:01 06:02,06:02 05:01,05:01 None None 11:30,14:76
RPKM HLA_A rpkm 228.1 ; HLA_B rpkm 19.84 ; HLA_DQA1 rpkm 0.03 ; HLA_DRB1 rpkm 0.05 ; HLA_C rpkm 129.95
Note In HLA_DRB1 11:30. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Soft_tissue Site Subtype Fibrous_tissue_and_uncertain_origin
Primary Histology Sarcoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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