Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
385 451

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,32:03 39:04,44:02 02:02,08:02 None None 03:02,03:02 14:76,14:76
RPKM HLA_DRB1 rpkm 0.03 ; HLA_A rpkm 3.93 ; HLA_C rpkm 0.18 ; HLA_B rpkm 0.14 ; HLA_DQB1 rpkm 0.03
Note In HLA_A 32:03 , HLA_C 08:02 , HLA_B 44:02 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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