Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_b_cell_leukaemia
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
348 395

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,32:01 08:01,15:01 03:03,07:01 01:02,01:02 None 06:03,03:04 13:01,03:02
RPKM HLA_DRB1 rpkm 31.8 ; HLA_B rpkm 91.83 ; HLA_DQA1 rpkm 0.97 ; HLA_DQB1 rpkm 13.08 ; HLA_C rpkm 57.08 ; HLA_A rpkm 55.27
Note In HLA_DRB1 13:01 and 03:02 , HLA_B 15:01 , HLA_DQA1 01:02 , HLA_DQB1 06:03 and 03:04 , HLA_C 07:01 , HLA_A 32:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_b_cell_leukaemia
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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