Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity European, Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
202 445

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 51:01,40:01 06:02,12:02 None None 03:02,03:02 01:03,11:34
RPKM HLA_B rpkm 0.25 ; HLA_DRB1 rpkm 0.05 ; HLA_C rpkm 0.31 ; HLA_A rpkm 30.22 ; HLA_DQB1 rpkm 0.03
Note In HLA_B 40:01 , HLA_C 12:02 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity European, Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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