Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Bone Site Subtype Femur
Primary Histology Other, Osteosarcoma Histology Subtype Multipotential_sarcoma, Ns
Gender Male Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
320 754

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:02,74:01 57:03,07:06 18:02,15:05 None None None None
RPKM HLA_B rpkm 517.35 ; HLA_C rpkm 345.6 ; HLA_A rpkm 325.6
Note In HLA_B 57:03 and 07:06 , HLA_C 15:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Bone Site Subtype Femur
Primary Histology Other, Osteosarcoma Histology Subtype Multipotential_sarcoma, Ns
Gender Male Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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