Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Bone Site Subtype Ns
Primary Histology Ewing_sarcoma-Peripheral_primitive_neuroectodermal_tumour, Ewings_sarcoma-Peripheral_primitive_neuroectodermal_tumour Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
166 396

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,02:01 44:02,07:06 05:01,07:02 None None 06:07,06:07 03:02,11:73
RPKM HLA_B rpkm 1.09 ; HLA_A rpkm 14.11 ; HLA_DRB1 rpkm 0.08 ; HLA_C rpkm 4.0 ; HLA_DQB1 rpkm 0.05
Note In HLA_B 07:06 , HLA_A 02:01 , HLA_DRB1 03:02 , HLA_DQB1 06:07. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Bone Site Subtype Ns
Primary Histology Ewing_sarcoma-Peripheral_primitive_neuroectodermal_tumour, Ewings_sarcoma-Peripheral_primitive_neuroectodermal_tumour Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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