Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
439 844

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:01,26:01 67:02,38:01 04:01,12:03 03:02,03:02 None 06:01,06:01 14:76,14:76
RPKM HLA_B rpkm 3.26 ; HLA_C rpkm 46.03 ; HLA_A rpkm 85.58 ; HLA_DQB1 rpkm 0.03 ; HLA_DRB1 rpkm 0.19 ; HLA_DQA1 rpkm 0.03
Note In HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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