Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
375 924

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,01:01 40:01,53:01 03:04,04:01 03:02,03:02 None 03:02,03:02 04:04,14:103
RPKM HLA_B rpkm 282.14 ; HLA_DQA1 rpkm 80.17 ; HLA_DRB1 rpkm 128.94 ; HLA_A rpkm 218.32 ; HLA_C rpkm 231.57 ; HLA_DQB1 rpkm 11.1
Note In HLA_B 40:01 , HLA_DQA1 03:02 , HLA_DRB1 04:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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