Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
216 485

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:01 14:01,40:01 03:04,08:02 03:02,03:02 None 02:02,02:02 10:04,10:04
RPKM HLA_DQA1 rpkm 0.03 ; HLA_B rpkm 2.53 ; HLA_A rpkm 97.33 ; HLA_C rpkm 16.59 ; HLA_DRB1 rpkm 0.03 ; HLA_DQB1 rpkm 0.03
Note In HLA_DQA1 03:02 , HLA_A 26:01 , HLA_C 08:02 , HLA_DQB1 02:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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