Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Bone_marrow

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
236 562

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,03:01 08:01,44:02 07:01,04:01 04:01,01:02 None 02:01,03:04 01:02,13:67
RPKM HLA_DQB1 rpkm 1.02 ; HLA_B rpkm 0.6 ; HLA_C rpkm 12.99 ; HLA_DQA1 rpkm 0.03 ; HLA_A rpkm 23.52 ; HLA_DRB1 rpkm 0.07
Note In HLA_DQB1 02:01 and 03:04 , HLA_B 44:02 , HLA_C 07:01 , HLA_DQA1 01:02 , HLA_DRB1 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Bone_marrow
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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