Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Bone Site Subtype Ns
Primary Histology Ewings_sarcoma-Peripheral_primitive_neuroectodermal_tumour Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Supra_orbital_area

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
49 50

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
25:01,01:01 08:01,08:01 07:01,07:01 05:02,05:02 None 02:02,05:01 03:38,12:27
RPKM HLA_DRB1 rpkm 0.18 ; HLA_A rpkm 35.32 ; HLA_DQB1 rpkm 0.15 ; HLA_DQA1 rpkm 0.05 ; HLA_C rpkm 8.71 ; HLA_B rpkm 5.47
Note In HLA_DQB1 02:02 , HLA_DQA1 05:02 , HLA_C 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Bone Site Subtype Ns
Primary Histology Ewings_sarcoma-Peripheral_primitive_neuroectodermal_tumour Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Supra_orbital_area
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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