Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Endometrium Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
2094 4495

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,26:03 54:01,51:01 01:02,03:04 None None 05:02,05:02 None
RPKM HLA_A rpkm 68.6 ; HLA_DQB1 rpkm 0.38 ; HLA_B rpkm 35.25 ; HLA_C rpkm 46.91
Note In HLA_A 26:03 , HLA_C 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Endometrium Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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