Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Biliary_tract Site Subtype Bile_duct
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
152 179

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 54:01,54:01 01:02,01:02 01:02,01:02 None None 11:09,11:09
RPKM HLA_DQA1 rpkm 0.03 ; HLA_A rpkm 208.39 ; HLA_C rpkm 39.12 ; HLA_B rpkm 19.11 ; HLA_DRB1 rpkm 0.05
Note In HLA_DQA1 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Biliary_tract Site Subtype Bile_duct
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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