Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Kidney Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Clear_cell_renal_cell_carcinoma
Gender Female Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
102 115

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:02,02:06 55:02,40:06 01:02,08:01 03:02,01:02 None 04:02,04:02 03:17,13:59
RPKM HLA_B rpkm 118.55 ; HLA_DQB1 rpkm 8.37 ; HLA_DRB1 rpkm 0.1 ; HLA_C rpkm 69.64 ; HLA_A rpkm 60.91 ; HLA_DQA1 rpkm 1.09
Note In HLA_B 40:06 , HLA_A 26:02 and 02:06 , HLA_DQA1 03:02 and 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Kidney Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Clear_cell_renal_cell_carcinoma
Gender Female Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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