Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age None
Ethnicity Asian Tumour Source Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
150 169

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 52:01,52:01 12:02,12:02 None None None 15:02,15:02
RPKM HLA_B rpkm 155.26 ; HLA_A rpkm 305.12 ; HLA_C rpkm 155.18 ; HLA_DRB1 rpkm 4.57
Note In HLA_DRB1 15:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age None
Ethnicity Asian Tumour Source Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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