Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Undifferentiated_adenocarcinoma
Gender Female Age None
Ethnicity Asian Tumour Source Ascites

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
240 279

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:01 40:02,35:01 03:04,03:04 05:02,05:02 None 03:09,03:09 11:01,12:01
RPKM HLA_DQB1 rpkm 3.77 ; HLA_DRB1 rpkm 17.93 ; HLA_B rpkm 151.73 ; HLA_C rpkm 162.19 ; HLA_A rpkm 263.18 ; HLA_DQA1 rpkm 0.26
Note In HLA_DQB1 03:09 , HLA_DRB1 11:01 , HLA_C 03:04 , HLA_A 26:01 , HLA_DQA1 05:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Undifferentiated_adenocarcinoma
Gender Female Age None
Ethnicity Asian Tumour Source Ascites
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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