Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Colon
Primary Histology Carcinoma Histology Subtype Ns
Gender Male Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
288 326

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,33:03 51:01,51:01 14:02,14:02 01:02,01:02 None 06:02,06:02 15:01,04:04
RPKM HLA_DQA1 rpkm 0.23 ; HLA_C rpkm 45.18 ; HLA_B rpkm 31.6 ; HLA_DQB1 rpkm 14.49 ; HLA_DRB1 rpkm 0.58 ; HLA_A rpkm 110.37
Note In HLA_DQA1 01:02 , HLA_DRB1 04:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Colon
Primary Histology Carcinoma Histology Subtype Ns
Gender Male Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background