Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Asian Tumour Source Ascites, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
178 205

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,26:01 40:01,15:01 04:01,15:02 None None 06:02,06:02 15:01,13:05
RPKM HLA_DRB1 rpkm 0.49 ; HLA_A rpkm 108.09 ; HLA_DQB1 rpkm 0.81 ; HLA_B rpkm 21.53 ; HLA_C rpkm 179.45
Note In HLA_DRB1 13:05 , HLA_DQB1 06:02 , HLA_B 15:01 , HLA_C 15:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Asian Tumour Source Ascites, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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