Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Adenocarcinoma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Ascites, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
113 125

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,33:03 58:01,44:03 03:02,07:01 01:02,01:02 None 06:09,06:09 13:02,13:02
RPKM HLA_B rpkm 25.01 ; HLA_DQB1 rpkm 6.93 ; HLA_DRB1 rpkm 8.8 ; HLA_DQA1 rpkm 0.02 ; HLA_A rpkm 129.46 ; HLA_C rpkm 51.59
Note In HLA_B 44:03 , HLA_DQB1 06:09 , HLA_DRB1 13:02 , HLA_DQA1 01:02 , HLA_C 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Adenocarcinoma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Ascites, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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