Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Ns, Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Ns
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
4981 15403

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,02:01 51:10,40:02 14:02,03:04 None None None 07:01,07:01
RPKM HLA_B rpkm 247.68 ; HLA_A rpkm 203.29 ; HLA_C rpkm 219.34 ; HLA_DRB1 rpkm 0.06
Note In HLA_B 51:10 and 40:02 , HLA_A 02:01 , HLA_C 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Ns, Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Ns
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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