Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Brenner_tumour
Gender Female Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
100 109

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,03:01 15:07,44:02 03:03,05:01 03:02,03:02 None 04:02,06:11 13:01,04:05
RPKM HLA_DQB1 rpkm 2.82 ; HLA_B rpkm 8.85 ; HLA_DRB1 rpkm 0.25 ; HLA_A rpkm 31.95 ; HLA_C rpkm 28.29 ; HLA_DQA1 rpkm 0.1
Note In HLA_DQB1 04:02 and 06:11 , HLA_B 15:07 , HLA_DRB1 13:01 and 04:05 , HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Brenner_tumour
Gender Female Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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