Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Caecum
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1461 1729

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:01 48:01,07:02 14:02,08:03 None None 05:03,03:02 14:03,14:03
RPKM HLA_B rpkm 14.67 ; HLA_DRB1 rpkm 1.52 ; HLA_C rpkm 95.04 ; HLA_DQB1 rpkm 0.22 ; HLA_A rpkm 0.83
Note In HLA_B 07:02 , HLA_DRB1 14:03 , HLA_C 08:03 , HLA_DQB1 05:03 and 03:02 , HLA_A 24:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Caecum
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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