Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Colon, Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male, Unknown Age Not Available
Ethnicity Asian Tumour Source Nan, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1065 1276

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:01 35:12,48:01 03:04,08:03 01:02,01:02 None 06:02,06:02 13:60,13:60
RPKM HLA_C rpkm 19.38 ; HLA_B rpkm 1.17 ; HLA_DQA1 rpkm 0.07 ; HLA_DQB1 rpkm 0.57 ; HLA_DRB1 rpkm 0.22 ; HLA_A rpkm 18.34
Note In HLA_C 08:03 , HLA_B 35:12 and 48:01 , HLA_DQA1 01:02 , HLA_DQB1 06:02 , HLA_A 02:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Colon, Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male, Unknown Age Not Available
Ethnicity Asian Tumour Source Nan, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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