Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Ns, Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
2471 6185

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:07,24:22 46:01,15:05 01:02,01:02 None None 05:01,05:01 13:12,11:14
RPKM HLA_DRB1 rpkm 0.34 ; HLA_A rpkm 9.21 ; HLA_B rpkm 64.01 ; HLA_C rpkm 91.27 ; HLA_DQB1 rpkm 0.06
Note In HLA_DRB1 13:12 and 11:14 , HLA_A 02:07 and 24:22 , HLA_B 15:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Ns, Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background